PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sevir.5G359100.6.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 452aa    MW: 49031.8 Da    PI: 7.0378
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sevir.5G359100.6.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.33.8e-09188228545
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                         k  rr+++NReAAr+sR+RKk +i++Le    +L++  ++L
  Sevir.5G359100.6.p 188 KTLRRLAQNREAARKSRLRKKTYIQNLESSRLKLTQLEQEL 228
                         7889************************9777777666555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-7184247IPR004827Basic-leucine zipper domain
PfamPF077167.9E-6185230IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.197186230IPR004827Basic-leucine zipper domain
CDDcd147083.13E-22188240No hitNo description
SuperFamilySSF579595.56E-7188231No hitNo description
Gene3DG3DSA:1.20.5.1702.3E-7189232No hitNo description
PROSITE patternPS000360191206IPR004827Basic-leucine zipper domain
PfamPF141441.7E-31270342IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    Send to blast
MESRRGGSAA AAAAAAAEDA GGAMPSFGPP QHSIHTDMNS MQPSRVADFG ALAQSAGFRI  60
EDLANINTGT LFNLKTNTHT ISNNPLQFGN YGKPISPSHI NTTTAATAAA RIDPQSLEQQ  120
TGAQPNLVAL PTGNIENWGE SAMADSPMTD TSTDPDTDER NQMFEQGLVA GPTASDSSDK  180
SRDKLDQKTL RRLAQNREAA RKSRLRKKTY IQNLESSRLK LTQLEQELQR ARQQGIFIST  240
SGDQPQSTSG NGALAFDMEY ARWLEEHNKH VNELRAAVNA HAGDNDLRGI VDSIMAHYDE  300
IFRLKGVAAK ADVFHVLSGM WKTPAERCFM WLGGFRSSEL LKSSQQAEDA LSQGMEALQQ  360
SLAETLASGS LGPAGSSGNV ASYMGQMAMA MGKLGTLENF LRQADNLRLQ TLQQMQRILT  420
TRQSARALLA ISDYFSRLRA LSSLWLARPR E*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00492DAPTransfer from AT5G06950Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankX691520.0X69152.1 Z.mays OBF3.2 mRNA for ocs-element binding factor 3.2.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002458658.10.0hypothetical protein SORBIDRAFT_03g037560
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLC5XMK10.0C5XMK1_SORBI; Putative uncharacterized protein Sb03g037560
STRINGSb03g037560.10.0(Sorghum bicolor)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-122bZIP family protein